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Nelson, C., K. Townsend, B S. Rao, P. Jones, and J. Zambreno, "Shepard: A Fast Exact Match Short Read Aligner", Proceedings of the International Conference on Formal Methods and Models for Codesign (MEMOCODE), July, 2012. PDF icon NelTow12A.pdf (134.73 KB)
Nelson, C., K. Townsend, O. Attia, P. Jones, and J. Zambreno, "RAMPS: A Reconfigurable Architecture for Minimal Perfect Sequencing", IEEE Transactions on Parallel and Distributed Systems (TPDS), vol. 27, issue 10, 2016. PDF icon NelTow16A.pdf (1.19 MB)