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C. Nelson, K. Townsend, O. Attia, P. Jones and J. Zambreno, "RAMPS: A Reconfigurable Architecture for Minimal Perfect Sequencing", IEEE Transactions on Parallel and Distributed Systems (TPDS), vol. 27, issue 10, 2016.  
C. Nelson, K. Townsend, B S. Rao, P. Jones and J. Zambreno, "Shepard: A Fast Exact Match Short Read Aligner", Proceedings of the International Conference on Formal Methods and Models for Codesign (MEMOCODE), July, 2012.